ResNMTF inner functiion

Apply ResNMTF to data, without stability analysis and for a specific number of biclusters

Usage

res_nmtf_inner(
  data,
  init_f = NULL,
  init_s = NULL,
  init_g = NULL,
  k_vec = NULL,
  phi = NULL,
  xi = NULL,
  psi = NULL,
  n_iters = NULL,
  num_repeats = 5,
  distance = "euclidean",
  no_clusts = FALSE
)

Arguments

data

list of matrices, data to be factorised

init_f

list of matrices, initialisation for F matrices

init_s

list of matrices, initialisation for S matrices

init_g

list of matrices, initialisation for G matrices

k_vec

integer, vector of integers, number of clusters to consider

phi

list of matrices, default is NULL, restriction matrices for F

xi

list of matrices, default is NULL, restriction matrices for S

psi

list of matrices, default is NULL, restriction matrices for G

n_iters

integer, default is NULL, number of iterations to run for

num_repeats

integer, default is 5, minimum value of 2 number of num_repeats to use for ??

distance

string, default is "euclidean", distance metric to use within the bisilhouette score

no_clusts

boolean, default is FALSE, whether to return the factorisation rather than the biclustering

Value

list of results from ResNMTF